Nobel Awarded for Advances in Harnessing Light

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Kenneth Chang in the New York Times:

The mastery of light through technology was the theme of this year’s Nobel Prize in Physics as the Royal Swedish Academy of Sciences honored breakthroughs in fiber optics and digital photography.

Half of the $1.4 million prize went to Charles K. Kao for insights in the mid-1960s about how to get light to travel long distances through glass strands, leading to a revolution in fiber optic cables. The other half of the prize was shared by two researchers at Bell Labs, Willard S. Boyle and George E. Smith, for inventing the semiconductor sensor known as a charge-coupled device, or CCD for short. CCDs now fill digital cameras by the millions.

More here.

Chromosome protection scoops Nobel

From Nature:

Telo-180 Three US scientists have won the Nobel Prize in Physiology or Medicine for discovering the structure of molecular caps called telomeres and working out how they protect chromosomes from degradation. Their discoveries in cell biology during the 1980s and 1990s opened new avenues of work, in ageing and in cancer research, which are still highly active today. The prize, announced on 5 October, is shared equally between Elizabeth Blackburn at the University of California, San Francisco, Carol Greider of the Johns Hopkins Medical School in Baltimore, Maryland, and Jack Szostak at Harvard Medical School in Boston, Massachusetts. The three have already won numerous prizes for their work, including sharing one of the 2006 Lasker awards, often considered to be a forerunner of the Nobel prize.

Their research revealed a fundamental aspect of how DNA, packed into chromosomes, is copied in its entirety by the DNA polymerase enzyme during cell division. The ends of the chromosomes are capped by telomeres, long thought to have a protective function (see 'Chromosome caps'). Without them, the chromosomes would be shortened during each cell division, because DNA polymerase is unable to copy to the very end of one of the two DNA strands it is replicating.

More here.

Tuesday Poem

Learning to Make an Oud in Nazareth

The first day he cut rosewood for the back,
bent sycamore into ribs and made a belly
of mahogany.
Let us go early to the vineyards
and see if the vines have budded
.
The sky was blue over the Jezreel valley
and the gilt dove shone
above the Church of the Annunciation.
The second day, he carved a camel-bone base
for the fingerboard.
I sat down under his shadow with delight.

The third day, he made a nut of sandalwood,
and a pickguard of black cherry.
He damascened a rose of horn
with arabesques
as lustrous as under-leaves of olive beside the sea.
I have found him whom my soul loves.
He inlaid the soundhole with ivory swans,
each pair a Valentine of entangled necks,
and fitted tuning pegs of apricot
to give a good smell when rubbed.

The fourth was a day for cutting
high strings of camel-gut. His left hand
shall be under my head
.
For the lower course, he twisted copper strings
pale as tarmac under frost.
He shall lie all night between my breasts.
The fifth day he laid down varnish.
Our couch is green and the beams of our house
are cedar and pine
. Behind the neck
he put a sign to keep off the Evil Eye.

Read more »

Self-Destructive Behavior in Cells May Hold Key to a Longer Life

Carl Zimmer in The New York Times:

Carl Deep down, we are all cannibals. Our cells are perpetually devouring themselves, shredding their own complex molecules to pieces and recycling them for new parts. Many of the details of our endless self-destruction have come to light only in the past few years. And to the surprise of many scientists, links are now emerging between this inner cannibalism and diseases like Alzheimer’s disease and cancer.

“There’s been an explosion,” said Daniel Klionsky of the University of Michigan. “All of a sudden, researchers in different fields are seeing a connection.” In fact, as Dr. Klionsky wrote in a paper published online in Trends in Cell Biology, this cannibalism may extend our lifespan. Increasing our body’s ability to self-destruct may, paradoxically, let us live longer. Our cells build two kinds of recycling factories. One kind, known as the proteasome, is a tiny cluster of proteins. It slurps up individual proteins like a child sucking a piece of spaghetti. Once inside the proteasome, the protein is chopped up into its building blocks.

More here.

The demise of the dollar

In a graphic illustration of the new world order, Arab states have launched secret moves with China, Russia and France to stop using the US currency for oil trading.

Robert Fisk in The Independent:

Dollar_247863t In the most profound financial change in recent Middle East history, Gulf Arabs are planning – along with China, Russia, Japan and France – to end dollar dealings for oil, moving instead to a basket of currencies including the Japanese yen and Chinese yuan, the euro, gold and a new, unified currency planned for nations in the Gulf Co-operation Council, including Saudi Arabia, Abu Dhabi, Kuwait and Qatar.

Secret meetings have already been held by finance ministers and central bank governors in Russia, China, Japan and Brazil to work on the scheme, which will mean that oil will no longer be priced in dollars.

The plans, confirmed to The Independent by both Gulf Arab and Chinese banking sources in Hong Kong, may help to explain the sudden rise in gold prices, but it also augurs an extraordinary transition from dollar markets within nine years.

More here.

Kotarski on Polanski

Our own Kris Kotarski in the Calgary Herald:

ScreenHunter_01 Oct. 06 10.25 Why do people who really should know better twist themselves into impossible positions trying to justify a famous man's crime?

That the Polanski hoopla is a reflection of our society is obvious, although the important lesson here is not the one that is being pushed by the Washington Post. This has little to do with Hollywood's moral core or the divide between “virtuous” America and “decadent” Europe, and even less to do with the divisions in American politics that the Post covers so well.

Too many people–liberals, conservatives, Americans, Europeans–have spoken up in a child rapist's defence for this to be a simple left/right, liberal/ conservative spat. This is a symptom of a much older illness, an echo of a time when the ruling elite could do whatever it pleased to the commoners, and when certain people could simply do no wrong.

This was not a “liberal elite” (another curious phrase from our present political lexicon)–this was the aristocracy and the clergy, who had separate rules of engagement for their own kind, and separate rules for the commoners. There were kings, lords, commoners, and slaves. And whether it was murder, rape, theft or cruelty, there was one standard for the elite, and another for the masses.

Today, everyone insists we're all equal before the law, but who are we kidding?

More here.

3 Americans Share Nobel for Medicine

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Nicholas Wade in the New York Times:

The Nobel Prize in Physiology or Medicine was awarded Monday to three American scientists who solved a problem of cell biology with deep relevance to cancer and aging. The three will receive equal shares of a prize worth around $1.4 million.

The recipients solved a longstanding puzzle involving the ends of chromosomes, the giant molecules of DNA that embody the genetic information. These ends, called telomeres, get shorter each time a cell divides and so serve as a kind of clock that counts off the cell’s allotted span of life.

The three winners are Elizabeth H. Blackburn of the University of California, San Francisco; Carol W. Greider of the Johns Hopkins University School of Medicine; and Jack W. Szostak of Massachusetts General Hospital.

More here. [Thanks to Winfield J. Abbe.]

The animal in us, the human in them

Jeff Warren in The Globe and Mail:

Dewaal_259508gm-a The book of nature is like the Bible: Everyone reads into it what they want.” So writes eminent primatologist Frans de Waal about a third of the way into his latest, The Age of Empathy: Nature's Lessons for a Kinder Society. As nature readers go, de Waal is among the most accomplished. He has spent the better part of 30 years studying chimpanzees and bonobos, sometimes in the wild, but mostly in his capacity as director of the Yerkes National Primate Research Center in Atlanta, Ga.

And what a sobering education the apes have given him. For six books, de Waal has chronicled their scheming and their turf battles, their amazing problem-solving abilities and sexual politics. From the start, it has been clear to de Waal that the apes represent a kind of proto-human society, with many of our same patterns and preoccupations. These days, there is nothing controversial about this view; it's trotted out by pundits and newspaper columnists at every opportunity, all of them enthralled by evolutionary psychology – the idea that all of human nature can be explained by adaptive responses formed on the prehistoric savannah – as a kind of arch-explanatory paradigm. If we want to understand ourselves, the thinking goes, then look to our ape ancestors, who exhibit many of the same traits in more elemental form.

De Waal is very much with this program, and he is an astute enough cultural commentator to recognize how the specific details of this narrative influence politics and society.

More here.

Monday, October 5, 2009

Sunday, October 4, 2009

There are 237 reasons why women have sex

Tanya Gold in The Guardian:

ScreenHunter_05 Oct. 04 18.12 Do you want to know why women have sex with men with tiny little feet? I am stroking a book called Why Women Have Sex. It is by Cindy Meston, a clinical psychologist, and David Buss, an evolutionary psychologist. It is a very thick, bulging book. I've never really wondered Why Women Have Sex. But after years of not asking the question, the answer is splayed before me.

Meston and Buss have interviewed 1,006 women from all over the world about their sexual motivation, and in doing so they have identified 237 different reasons why women have sex. Not 235. Not 236. But 237. And what are they? From the reams of confessions, it emerges that women have sex for physical, emotional and material reasons; to boost their self-esteem, to keep their lovers, or because they are raped or coerced. Love? That's just a song. We are among the bad apes now.

More here.

Roman Polanski sex case arrest provokes backlash in Hollywood

Paul Harris in The Observer:

ScreenHunter_04 Oct. 04 17.27 The Polanski backlash has spread far and wide. He was never popular at all on the right wing of America's culture, but now middle America is firmly in favour of seeing him in a Californian courtroom. Talkshow hosts, radio commentators and newspaper editorials from coast to coast have all insisted that the arrest was long overdue and that Polanski needs to be brought to the US.

“Hollywood people really don't see the world in the same way as average people… that is why there is a backlash,” said Mike Levine, a Hollywood PR expert.

But it is perhaps no surprise that the gap between Hollywood and the rest of America has grown so large on this particular case. Because of his long and illustrious career, Polanski is a friend and colleague of nearly all the main players in the film world. They are his confidantes and his peers. His movies have made them stars and helped them to earn millions. They live in the same rarefied world of global fame. “Elite Hollywood culture is protecting one of its own,” said Alexander Riley, a professor of sociology at Bucknell University.

More here.

I’m a combination of an old man and a baby

Roman_polanski_1890854

ON DENYING CHRISTIAN IMAGERY IN HIS FILM “KNIFE IN THE WATER” An accident. The rope [in the shape of a halo] was simply to cushion his head. And he spreads his arms because, you know, he wants a better suntan (1972)

ASKED BY MIA FARROW IF HE WAS OUT OF HIS MIND, WHEN DIRECTING HER TO WALK ACROSS SIX LANES OF TRAFFIC I may be, but please do it (1967)

ON HIS FILM “FRANTIC”, STARRING HARRISON FORD It's a film about jet-lag (1988)

THE WHOLE OF HIS ESSAY FOR A FRENCH NEWSPAPER ON WHY HE MAKES FILMS I wonder (1987)

more from Roman Polanski at The Guardian here.

I’ll always love her, though

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The Association for the Advancement of Advanced Intelligence report . . . will also grapple . . . [with] probable changes in human-computer relationships. How would it be, for example, to relate to a machine that is as intelligent as your spouse?
The Times.

Don’t get me wrong; my wife is great. I bristle when I overhear someone say that my DVR is smarter than she is. Chloe went to SUNY-Binghamton. She’s plenty smart. My DVR knows French, but so what? It’s not like I go to French restaurants with my DVR. . . . O.K., one time I went to Le Pescadou with my DVR. Chloe and I were going through a weird time. I was hungry. There was nothing on TV. No, that last part about TV is a joke. Get it? Because I was with my DVR? Doesn’t matter. Point is— No, actually, it does matter. My DVR would have got it.

My DVR is very funny. Not funny ha-ha, not like my A.T.M., but funny. It loves that movie “My Dinner with Andre.” Between you and me, I have no idea if that movie is funny or not. I try to laugh in the right places, but who knows? And, well, sometimes it’s nice to not always be the person who “knows” when to laugh, to be with someone—O.K., not someone, your DVR, or a G.P.S. system—and learn something.

more from Zev Borow at The New Yorker here.

Jatin Das at San Francisco (Sep 20 to Oct 20)

Das Jatin Das, one of the most prolific figurative painters, is also a graphic artist, sculptor, muralist and a poet. He was born in 1941 in Mayurbhanj, Orissa. Jatin studied painting at Sir J J School of Art in Bombay (1957-62). Since he finished his art educated he has been participating in all important national and international art exhibitions, namely the Biennales in Paris (1971), and in Venice (197 8) and the Documenta in Kessel (1975).

A tirelessly innovative explorer of dynamic human figures in terms of linear structuration and breezy brushwork, Jatin Das focuses mainly on man-woman relationships in varying moments of crises, contacts, revelation, and emotional tension. There is a monumentality in his treatment of human forms, which is retained even when the forms are energized by way of rhythmic discontinuities of color-planes and rushing lines. A sensitive colorist who refuses to treat his imagery in 3-D volumes, Jatin charges his palette with emotional nuances.

More here. (Note: Jatin Das, who is also the father of my brilliant friend Nandita Das, is showing his work at The Artist Alley Gallery in San Francisco. Please go see it if you can.)

Ancient Skeleton May Rewrite Earliest Chapter of Human Evolution

From Science:

Ape Researchers have unveiled the oldest known skeleton of a putative human ancestor–and it is full of surprises. Although the creature, named Ardipithecus ramidus, had a brain and body the size of a chimpanzee, it did not knuckle-walk or swing through the trees like an ape. Instead, “Ardi” walked upright, with a big, stiff foot and short, wide pelvis, researchers report in Science. “We thought Lucy was the find of the century,” says paleoanthropologist Andrew Hill of Yale University, referring to the famous 3.2-million-year-old skeleton that revolutionized thinking about human origins. “But in retrospect, it was not.”

Researchers have long argued about whether our early ancestors passed through a great-ape stage in which they looked like protochimpanzees, with short backs; arms adapted for swinging through the trees; and a pelvis and limbs adapted for knuckle-walking (Science, 21 November 1969, p. 953). This “troglodytian,” or chimpanzee, model for early human behavior (named for the common chimpanzee, Pan troglodytes) suggests that our ancestors lost many of the key adaptations still found in chimpanzees, bonobos, and gorillas, such as daggerlike canines and knuckle-walking, which those apes were thought to have inherited from a common ancestor.

More here.

Infections responsible for four-fifths of cancers?

Andrew Grant in Discover:

Breast%20Cancer%20Cell Most current research into the causes of cancer focuses on genes and environmental triggers. Evolutionary biologist Paul Ewald of the University of Louisville in Kentucky argues that scientists have overlooked the most important cause: parasites, especially viruses. Blending medicine and Darwinian biology, Ewald considers cancer and other diseases from the pathogen’s point of view, showing how natural selection determines why the smallpox virus, for instance, is a ruthless killer while viruses for the common cold are relatively benign. He says that once we identify the viruses that trigger cancer, we can work to prevent their transmission and force them to evolve from fatal scourges into mere nuisances, eventually turning cancer into a manageable disease.

DISCOVER: What is new about the way you are thinking about disease?
Paul Ewald: I apply Darwinian principles to medicine with the goal of solving problems. Medicine is not very good at addressing evolution, and to me that’s a great problem in regard to infectious disease. Humans barely evolve quickly enough to adjust to rapidly evolving infectious agents.

D: Why do you believe that viruses lie behind many types of cancer?
PE: To progress toward cancer, you need a few specific genes to be mutated, within a limited number of cell divisions, to cause the cells to divide uncontrollably. But if you mutated almost any of the other 30,000 genes, the cells would die or be crippled. So how do all those specific mutations occur so rapidly without destroying the cells? It turns out that each virus that’s been studied and associated with cancer—such as hepatitis B with liver cancer or human papilloma virus with cervical cancer—evolves characteristics that allow it to target those genes immediately upon infection. They’re pushing cells to the brink of cancer because the cells will grow faster with the virus embedded inside and won’t be able to stop dividing. These viruses don’t really benefit if you get cancer, but they do benefit when the viral genome can replicate and persist despite a sophisticated immune system.

More here.

How Often Do Women Falsely Cry Rape?

Emily Bazelon and Rachael Larimore in Slate:

ScreenHunter_03 Oct. 04 09.38 Because of the 18-year-old Hofstra student who recanted after telling police that five men had tricked her into a bathroom and then gang raped her two weeks ago, that question has been flying around the Internet. As Cathy Young notes in Newsday, the answers often fall into one of two camps. “Many feminists argue that the problem of false accusations is so minuscule that to discuss it extensively is a harmful distraction from the far more serious problem of rape. On the other side are men's-rights activists, claiming that false accusations are as much of a scourge as rape itself.”

But isn't the rate of false rape charges an empirical question, with a specific answer that isn't vulnerable to ideological twisting? Yes and no. There has been a burst of research on this subject. Some of it is careful, but much of it is questionable. While most of the good studies converge at a rate of about 8 percent to 10 percent for false rape charges, the literature isn't quite definitive enough to stamp out the far higher estimates. And even if we go by the lower numbers, there's the question of interpretation. If one in 10 charges of rape is made up, is that a dangerously high rate or an acceptably low one? To put this in perspective, if we use the Bureau of Justice Statistics that show about 200,000 rapes in 2008, we could be looking at as many as 20,000 false accusations.

More here.