Whether Coronavirus evolves to be deadlier or not may depend on us

Laura Spinney in The Guardian:

Letting the virus that causes Covid-19 circulate more-or-less freely is dangerous not only because it risks overwhelming hospitals and so endangering lives unnecessarily, but also because it could delay the evolution of the virus to a more benign form and potentially even make it more lethal.

Though the data is still sketchy and the measures crude, this effect may already be influencing the difference in death rates between Sweden – which took a relaxed approach to containment until recently – and Norway, whose measures have been much stricter. Sweden has more than three times as many deaths per 100 cases as its neighbour.

The explanation for this startling gap may lie partly in natural selection, and the biological arms race between a pathogen and its host. Within any population, there is genetic variation. Viruses are no different. Some versions of the virus will be very slightly more dangerous to human health – more virulent – others less so. If the conditions are right, the slightly more virulent ones will begin to predominate and cause more damage.

More here.

Erin Brockovich: Dear Joe Biden: are you kidding me?

Erin Brockovich in The Guardian:

As picks for President-elect Joe Biden’s Environmental Protection Agency (EPA) transition team were announced, I felt concerned and disheartened about a chemical industry insider being on the list. Are you kidding me?

Michael McCabe, a former employee of Biden and a former deputy Environmental Protection Agency administrator, later jumped ship to work as a consultant on communication strategy for DuPont during a time when the chemical company was looking to fight regulations of their star chemical perfluorooctanoic acid (PFOA) also known as C8. The toxic manmade chemical is used in everything from waterproof clothes, stain-resistant textiles and food packaging to non-stick pans. The compound has been linked to lowered fertility, cancer and liver damage. The Guardian reported this week that Harvard school of public health professor Philippe Grandjean, who studies environmental health, warns that PFAS chemicals, of which PFOA is one, might reduce the efficacy of a Covid-19 vaccine.

This smells of the dawn of the same old. To quote the Who: meet the new boss, same as the old boss.

More here.

Stanford team creates cellular atlas of the human lung

Bob Yirka in Phys.Org:

A team of researchers from multiple departments at Stanford University has created a cellular atlas of the human lung that highlights the dozens of cell types that comprise parts of the lungs. In their paper published in the journal Nature, the researchers describe their work (mostly involving single-cell RNA sequencing) and some of the things they learned about the lungs during their effort. To create the atlas, the researchers collected  from bronchiole, bronchi and alveolar regions of the lungs, along with associated . Each of the samples was broken down into its cellular components, which were then sorted by type: immune, epithelial, endothelia or stomal. The researchers generated transcriptomes for approximately 75,000 cells. Using markers, the team then clustered the cells to reveal 58 distinct cell populations. In so doing, they were able to generate expression profiles for 91 percent of lung types—and also found 14 lung cell types not previously known to science. They also found approximately 200 markers that could be used to identify the unknown types they found.

The team found they were able to use the resulting atlas to trace hormone targets in the lungs. In so doing, they found that some  were expressed widely across different parts of the lungs, while others were not. And as part of this secondary effort, the researchers also identified areas where 233 genes are expressed that could be used by scientists working on understanding and curing a wide variety of lung diseases.

More here.

Will Trump Burn the Evidence?

Jill Lepore in The New Yorker:

Donald Trump is not much of a note-taker, and he does not like his staff to take notes. He has a habit of tearing up documents at the close of meetings. (Records analysts, armed with Scotch Tape, have tried to put the pieces back together.) No real record exists for five meetings Trump had with Vladimir Putin during the first two years of his Presidency. Members of his staff have routinely used apps that automatically erase text messages, and Trump often deletes his own tweets, notwithstanding a warning from the National Archives and Records Administration that doing so contravenes the Presidential Records Act.

Trump cannot abide documentation for fear of disclosure, and cannot abide disclosure for fear of disparagement. For decades, in private life, he required people who worked with him, and with the Trump Organization, to sign nondisclosure agreements, pledging never to say a bad word about him, his family, or his businesses. He also extracted nondisclosure agreements from women with whom he had or is alleged to have had sex, including both of his ex-wives. In 2015 and 2016, he required these contracts from people involved in his campaign, including a distributor of his “Make America Great Again” hats. (Hillary Clinton’s 2016 campaign required N.D.A.s from some employees, too. In 2020, Joe Biden called on Michael Bloomberg to release his former employees from such agreements.) In 2017, Trump, unable to distinguish between private life and public service, carried his practice of requiring nondisclosure agreements into the Presidency, demanding that senior White House staff sign N.D.A.s. According to the Washington Post, at least one of them, in draft form, included this language: “I understand that the United States Government or, upon completion of the term(s) of Mr. Donald J. Trump, an authorized representative of Mr. Trump, may seek any remedy available to enforce this Agreement including, but not limited to, application for a court order prohibiting disclosure of information in breach of this Agreement.” Aides warned him that, for White House employees, such agreements are likely not legally enforceable. The White House counsel, Don McGahn, refused to distribute them; eventually, he relented, and the chief of staff, Reince Priebus, pressured employees to sign them.

More here.

Thursday Poem

Things I Didn’t Know I Loved

it’s 1962 March 28th
I’m sitting by the window on the Prague-Berlin train
night is falling
I never knew I liked
night descending like a tired bird on a smoky wet plain
I don’t like
comparing nightfall to a tired bird

I didn’t know I loved the earth
can someone who hasn’t worked the earth love it
I’ve never worked the earth
it must be my only Platonic love

and here I’ve loved rivers all this time
whether motionless like this they curl skirting the hills
European hills crowned with chateaus
or whether stretched out flat as far as the eye can see
I know you can’t wash in the same river even once
I know the river will bring new lights you’ll never see
I know we live slightly longer than a horse but not nearly as long as a crow
I know this has troubled people before
and will trouble those after me
I know all this has been said a thousand times before
and will be said after me

I didn’t know I loved the sky
cloudy or clear
the blue vault Andrei studied on his back at Borodino
in prison I translated both volumes of War and Peace into Turkish
I hear voices
not from the blue vault but from the yard
the guards are beating someone again
I didn’t know I loved trees
bare beeches near Moscow in Peredelkino
they come upon me in winter noble and modest
beeches are Russian the way poplars are Turkish
“the poplars of Izmir
losing their leaves. . .
they call me The Knife. . .
lover like a young tree. . .
I blow stately mansions sky-high”
in the Ilgaz woods in 1920 I tied an embroidered linen handkerchief
to a pine bough for luck

Read more »

Lovers in the Hands of a Patient God

S. G. Belknap at The Point:

James never stopped short in an exploration or an argument—and for him that meant never stopping short of the biggest question: the religious one. His thinking of the late 1890s kept pushing in this direction, culminating in the Gifford Lectures delivered in Edinburgh in 1901 and 1902, the lectures known to posterity as The Varieties of Religious Experience. James felt that the question of this world and the other world was somehow decisive for all of us, whichever way we answered it. And that included a whole lot of answers for someone like William James—attender of séances, consulter of mediums and all-around junkie for experience. In “The Will to Believe,” James is mostly interested in leveling the playing field vis-à-vis his skeptical colleagues. When it comes down to it, he wonders, why can’t we just go ahead and will the belief in God? The stern-minded skeptic is happy to object: we have no evidence for it. James replies: we have no evidence against it. The skeptic concedes, and objects again: well, then, I’ll wait until we have decisive evidence one way or the other. William James: to spend a life in indecision is no different from choosing against it; for example, if you have no decisive evidence that a potential career is best for you, you can’t just delay your decision until you die. The skeptic: but religion is not like that. William James: why not?

more here.

Harold Bloom Finally Betrays How Little He Really Understood Literature

Philip Hensher at The Spectator:

No one is going to base a claim for Bloom’s merits on this final book. But it does indicate, with painful acuity, that the critic may have had little understanding of how literature is made — which is not out of ideas, as Mallarmé patiently explained to Cézanne. It doesn’t achieve its effects by saying ‘this is funny’ or ‘this is so moving’. It relishes its own voice — and to dwell on what it has stolen from others misses its ambition.

Bloom spent his life talking about literature to a captive audience, and at the end it looks to me as if he missed the point, saying with grandiose but comic insufficiency of evidence that Yeats’s ‘Under Ben Bulben’ is ‘of a badness not to be believed’. Well, that was Yeats’s last word, and this is Harold Bloom’s. I wonder — as Ronald Firbank used to say when he heard something unusually absurd.

more here.

Fermentation as Metaphor: An Interview with Sandor Katz

From Emergence Magazine:

Emergence Magazine: You describe yourself as a fermentation revivalist so I wonder if we could start by having you share a bit about what that means to you.

Sandor Katz: Well, sure. The reason I started calling myself a fermentation revivalist is from my sense of how common fermentation has been in the not too distant past and it’s so integral to all of our food traditions. Whatever part of the world our ancestors came from, fermentation is an essential part of how people make effective use of whatever food resources are available to them, but in the last several generations and at different paces in different parts of the world, people have become increasingly distanced from the production of food and all of the processes that we use to transform the raw products of agriculture into all of the foods that people eat and drink. And it so happens that the same time period where these processes became more mysterious and distanced to people is also the time when the war on bacteria developed. People developed this fear, projected all of their fear of bacteria onto these ancient and important transformative fermentation processes. So when I call myself a fermentation revivalist, it’s about demystifying the process of fermentation, getting people comfortable with it, and encouraging people to familiarize themselves with processes that are extremely important but have become mysterious for people.

More here.

The biological research putting purpose back into life

Philip Ball in Aeon:

Animal immune systems depend on white blood cells called macrophages that devour and engulf invaders. The cells pursue with determination and gusto: under a microscope you can watch a blob-like macrophage chase a bacterium across the slide, switching course this way and that as its prey tries to escape through an obstacle course of red blood cells, before it finally catches the rogue microbe and gobbles it up.

But hang on: isn’t this an absurdly anthropomorphic way of describing a biological process? Single cells don’t have minds of their own – so surely they don’t have goals, determination, gusto? When we attribute aims and purposes to these primitive organisms, aren’t we just succumbing to an illusion?

Indeed, you might suspect this is a real-life version of a classic psychology experiment from 1944, which revealed the human impulse to attribute goals and narratives to what we see. When Fritz Heider and Marianne Simmel showed people a crudely animated movie featuring a circle and two triangles, most viewers constructed a melodramatic tale of pursuit and rescue – even though they were just observing abstract geometric shapes moving about in space.

Yet is our sense that the macrophage has goals and purpose really just a narrative projection? After all, we can’t meaningfully describe what a macrophage even is without referring to its purpose: it exists precisely to conduct this kind of ‘seek and destroy’ manoeuvre.

More here.

A Culture Canceled

Chris Arnade in American Compass:

The current debates over cancel culture are odd because few involved in them have been canceled, or risk being canceled, while entire institutions are indeed being canceled. Institutions that serve and amplify the interests of the working class, such as local newspapers, unions, and churches.

The death of local journalism is at least acknowledged by those involved in the debate as a problem. They are rightly concerned that smaller local newspapers being replaced by far away conglomerates hurts “left-behind” communities since it closes a forum where their issues could be heard, elevated, and addressed.

Getting less attention is the death of churches and unions. Lower income neighborhoods are littered with boarded up versions of both, a result of America’s embrace of a noxious mix of centralized economic power and de-centralized personal freedom.

Both are essential in giving power to the working class, providing them communities where they can go to be heard, and have any needs acknowledged, and perhaps brought to a higher authority to be solved.

More here.

Seigneur Moments: On Martin Amis

Kevin Power at the Dublin Review of Books:

“There is only one school,” Amis has said, “that of talent.” Only the talented would ever think this, and only the supremely talented would ever say it out loud. Inside Story is subtitled How to Write. But Amis has been telling us how to write for half a century now, and not just in his criticism. The virtuoso is always also a pedagogue. Look – this is how you do it! And the feudal lord – the seigneur – is, by definition, an aristocrat (and, not incidentally, by definition male): “rangy, well-travelled, big-cocked”, in the mocking, but also not-quite-mocking, words of Charles Highway in The Rachel Papers (1973). When Amis fails, this seigneurialism is what he’s left with: all those epigrams! All those cringey jokes! That tone of sneering condescension! (See Yellow DogThe Pregnant WidowLionel Asbo. Seigneurialism – anathematised as “male privilege” – is what feminist critics have tended to find so rebarbative in Amis’s work, and they’re not wrong.) When he succeeds, the seigneurialism is merely part of the effect (see MoneyLondon FieldsTime’s Arrow, almost all of the nonfiction).

more here.

The Story of Joy Division

Pippa Bailey at The New Statesman:

The story of Joy Division, and later New Order, is repeated so often it feels more like myth than reality. Maxine Peake’s voice is full of whispered awe as she leads us through a story that begins with three simple words – “Band seeks singer” – and ends with the making of the iconic “Blue Monday”.

Transmissions takes in Factory Records, Unknown Pleasures, Ian Curtis’s suicide and the Haçienda, with interviews from Peter Hook, Stephen Morris, Bernard Sumner and others. It’s a story about Manchester, too, given authenticity by Peake’s Mancunian accent. (“There is a wilfulness in the psyche of Manchester,” says Peter Saville, and I imagine Andy Burnham nodding furiously.) For those who know this story well, there’s little new here, but it’s a joy all the same.

more here.

When I Step Outside, I Step Into a Country of Men Who Stare

Fatima Bhojani in The New York Times:

ISLAMABAD, Pakistan — I am angry. All the time. I’ve been angry for years. Ever since I began to grasp the staggering extent of violence — emotional, mental and physical — against women in Pakistan. Women here, all 100 million of us, exist in collective fury. “Every day, I am reminded of a reason I shouldn’t exist,” my 19-year-old friend recently told me in a cafe in Islamabad. When she gets into an Uber, she sits right behind the driver so that he can’t reach back and grab her. We agreed that we would jump out of a moving car if that ever happened. We debated whether pepper spray was better than a knife. When I step outside, I step into a country of men who stare. I could be making the short walk from my car to the bookstore or walking through the aisles at the supermarket. I could be wrapped in a shawl or behind two layers of face mask. But I will be followed by searing eyes, X-raying me. Because here, it is culturally acceptable for men to gape at women unblinkingly, as if we are all in a staring contest that nobody told half the population about, a contest hinged on a subtle form of psychological violence.

…This country fails its women from the very top of government leadership to those who live with us in our homes. In September, a woman was raped beside a major highway near Lahore, Pakistan’s second-largest city. Around 1 a.m., her car ran out of fuel. She called the police and waited. Two armed men broke through the windows and assaulted her in a nearby field. The most senior police official in Lahore remarked that the survivor was assaulted because, he assumed, she “was traveling late at night without her husband’s permission.” An elderly woman in my apartment building in Islamabad, remarked, “Apni izzat apnay haath mein — Your honor is in your own hands. In Pakistan, sexual assault comes with stigma, the notion that a woman by being on the receiving end of a violent crime has brought shame to herself and her family. Societal judgment is a major reason survivors don’t come forward. Responding to the Lahore assault, Prime Minister Imran Khan proposed chemical castration of the rapists. His endorsement of archaic punishments rather than a sincere promise to undertake the difficult, lengthy and necessary work of reforming criminal and legal procedures is part of the problem. The conviction rate for sexual assault is around 3 percent, according to War Against Rape, a local nonprofit.

More here.

Should America Still Police the World?

Daniel Immerwahr in The New Yorker:

Robert Gates’s first memoir was titled “From the Shadows,” and that is an apt description of where Gates has comfortably resided. He is not a flashy man—a colleague once likened him to “the guy at P. C. Richards who sold microwave ovens”—but he has been for decades a quietly persistent presence in foreign policymaking. Gates has served as the Defense Secretary, C.I.A. chief, and deputy national-security adviser, among other roles. Unusually, he has occupied high positions under both Democratic and Republican Presidents. After George W. Bush placed him in charge of the Defense Department, Barack Obama kept him there as a trusted source of counsel. He has called Biden “a man of genuine integrity” and Trump “unfit to be Commander-in-Chief.”

Gates’s latest book, “Exercise of Power,” offers a stark view of the world. The country is “challenged on every front,” Gates believes. The places the United States must police are, in his various descriptions, a “bane” (Iran), a “curse” (Iraq), a “primitive country” (Afghanistan), and a “sinkhole of conflict and terrorism” (the Middle East). Its adversaries form a rogue’s gallery of “bad guys,” “thugs,” “serial cheaters and liars,” and “ever-duplicitous Pakistanis.”

More here.

Wednesday Poem

Untitled

Lord,
……… when you send the rain,
……… think about it, please,
……… a little?
Do
……… not get carried away
……… by the sound of falling water,
……… the marvelous light
……… on the falling water.
I
……… am beneath that water.
……… It falls with great force
……… and the light
Blinds
……… me to the light.

by James Baldwin – 1924-1987

Buster Keaton Falls Up

John Plotz in Public Books:

Comedy inverts norms and breaks barriers. But in order to reveal, as Northrop Frye suggested it must, “absurd or irrational [patriarchal] law,” comedy requires a fall guy. There has to be somebody on whom that law can come crashing down, in all its absurdity, all its irrationality—somebody who improbably emerges at the end, unscathed or even triumphant. Buster Keaton, that beautifully deadpan clown known as “The Great Stone Face,” had the pliability—and the subtle anarchic capacity for nonviolent resistance—to fill that role like nobody else before him. Or since.

Keaton is remembered now as a brilliant stuntman and inventor of trick shots (see, for instance, the cutaway walls of the house in 1921’s The High Sign). However, his true genius resides in his delightful disorientation from—and re-orientation to—a world that is never quite what he takes it to be.

More here.